Tan, Longzhi; Xie, X. Sunney "A Near-complete Spatial Map of Olfactory Receptors in the Mouse Main Olfactory Epithelium," Chem Senses 43(6), 427-432. DOI:10.1093/chemse/bjy030 (2018)

Tan, Longzhi; Li, Qian; Xie, X Sunney "Olfactory sensory neurons transiently express multiple olfactory receptors during development," Mol Syst Biol 11:844, DOI:10.15252/msb.20156639 (2015)

Chen, Huiyi; Shiroguchi, Katsuyuki; Ge, Hao; Xie, X. Sunney "Genome-wide study of mRNA degradation and transcript elongation in Escherichia coli," Mol Syst Biol 11:781 DOI:10.15252/msb.20145794 (2015)

Ge, Hao; Qian, Hong; and Xie, X. Sunney "Stochastic Phenotype Transition of a Single Cell in an Intermediate Region of Gene State Switching," Phys Rev Lett 114(7), 078101, DOI:10.1103/PhysRevLett.114.078101 (2015)

Chen, Huiyi; Shiroguchi, Katsuyuki; Ge, Hao; Xie, X. Sunney "Genome-wide study of mRNA degradation and transcript elongation in Escherichia coli," Mol Syst Biol 11:781 DOI:10.15252/msb.20145794 (2015)

Chong, Shasha; Chen, Chongyi; Ge, Hao; Xie, X. Sunney. "Mechanism of Transcriptional Bursting in Bacteria," Cell 158, 314-326 DOI:http://dx.doi.org/10.1016/j.cell.2014.05.038 (2014)

Zhao, Ziqing W.; Roy, Rahul; Gebhardt, J. Christof M.; Suter, David M.; Chapman, Alec R.; Xie, X. Sunney. "Spatial organization of RNA polymerase II inside a mammalian cell nucleus revealed by reflected light-sheet superresolution microscopy," PNAS 111, 681-686 DOI:10.1073/pnas.1318496111 (2014)

Tan, Longzhi; Zong, Chenghang; Xie, X. Sunney. "Rare event of histone demethylation can initiate singular gene expression of olfactory receptors," PNAS 110,21148-21152 DOI: 10.1073/pnas.1321511111 (2013)

Gebhardt, J. Christof M.; Suter, David M.; Roy, Rahul; Zhao, Ziqing W.; Chapman, Alec R.; Basu, Srinjan; Maniatis, Tom; Xie, X. Sunney. "Single-Molecule Imaging of Transcription Factor Binding to DNA in Live Mammalian Cells," Nat Methods 10, 421-426 DOI:10.1038/NMETH.2411 (2013)

Wang, Wenqin; Li, Gene-Wei; Chen, Chongyi; Xie, X. Sunney; Zhuang, Xiaowei. "Chromosome Organization by a Nucleoid-Associated Protein in Live Bacteria," Science, 333, 1445-1449 (2011).

Li, Gene-Wei; Xie, X. Sunney. "Central Dogma at the Single-Molecule Level in Living Cells," Nature, 475, 308-315 (2011).

Xie, X. Sunney "Enzymology and Life at the Single Molecule Level" in Single Molecule Spectroscopy in Chemistry, Physics and Biology Nobel Symposium, Edited by Astrid Graslund, et al. p. 435-448, Springer Series in Chemical Physics, Springer-Verlag Berlin Heidelberg (2010).

Taniguchi, Yuichi; Choi, Paul J.; Li, Gene-Wei; Chen, Huiyi; Babu, Mohan; Hearn, Jeremy; Emili, Andrew; Xie, X. Sunney "Quantifying E. coli Proteome and Transcriptome with Single-Molecule Sensitivity in Single Cells" Science, 329, 533-538 (2010).

Choi, Paul J.; Xie, X. Sunney; Shakhnovich, Eugene I. "Stochastic Switching in Gene Networks Can Occur by a Single-Molecule Event or Many Molecular Steps" J. Mol. Biol. 396, 230-244 (2010).

Sims, Peter A.; Xie, X. Sunney "Probing Dynein and Kinesin Stepping with Mechanical Manipulation in a Living Cell" ChemPhysChem, 10, 1511-1516 (2009).

Choi, Paul J.; Cai, Long; Frieda, Kirsten; Xie, X. Sunney "A Stochastic Single-Molecule Event Triggers Phenotype Switching of a Bacterial Cell," Science, 322, 442-446 (2008).

Xie, X. Sunney; Choi, Paul J.; Li, Gene-Wei; Lee, Nam Ki; Lia, Giuseppe "Single-Molecule Approach to Molecular Biology in Living Bacterial Cells," Annu. Rev. Biophys, 37, 417-444 (2008).

Nan, Xiaolin; Sims, Peter A.; Xie, X. Sunney "Organelle Tracking in a Living Cell with Microsecond Time Resolution and Nanometer Spatial Precision," ChemPhysChem, 9, 707-712 (2008).

Xiao, Jie; Elf, Johan; Li, Gene-Wei; Yu, Ji; Xie, S. Sunney "Imaging Gene Expression in Living Cells at the Single-Molecule Level" in "Single-Molecule Techniques A Laboratory Manual" Edited by Paul R. Selvin and Taekjip Ha, p 149-170, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, 2008.

Elf, Johan; Li, Gene-Wei; Xie, X. Sunney "Probing Transcription Factor Dynamics at the Single-Molecule Level in a Living Cell," Science, 316, 1191-1194 (2007).

Friedman, Nir; Cai, Long; Xie, X. Sunney "Linking Stochastic Dynamics to Population Distribution: An Analytical Framework of Gene Expression," Phys. Rev. Lett. 97, 168302 (2006).

Xie, X. Sunney; Yu, Ji; Yang, Wei Yuan "Living Cells as Test Tubes," Science, 312, 228-230 (2006).

Yu, Ji; Xiao, Jie; Ren, Xiaojia; Lao, Kaiqin; Xie, X. Sunney; "Probing Gene Expression in Live Cells, One Protein Molecule at a Time," Science, 311, 1600-1603 (2006).

Cai, Long; Friedman, Nir; Xie, X. Sunney "Stochastic protein expression in individual cells at the single molecule level," Nature, 440, 358-362 (2006).