Nan, Xiaolin; Sims, Peter A.; Chen, Peng; Xie, X. Sunney "Observation of Individual Microtubule Motor Steps in Living Cells with Endocytosed Quantum Dots," J. Phys. Chem. 109, 24220-24224 (2005).

Min, Wei; Jiang, Liang; Yu, Ji; Kou, S.C.; Qian, Hong; Xie, X. Sunney "Nonequilibrium Steady State of a Nanometric Biochemical System: Determining the Thermodynamic Driving Force from Single Enzyme Turnover Time Traces," Nano Lett. 5, 2373-2378  (2005).

Min, Wei; English, Brian P.; Luo, Guobin; Cherayil, Binny J.; Kou, S.C.; Xie, X. Sunney "Fluctuating Enzymes: Lessons from Single-Molecule Studies," Acc. Chem. Res. 38, 923-931 (2005).

Debnath, Pallavi; Min, Wei; Xie, X. Sunney; Cherayil, Binny J. "Multiple time scale dynamics of distance fluctuations in a semiflexible polymer: A one-dimensional generalized Langevin equation treatment," J. Chem. Phys. 123, 204903 (2005).

Evans, Conor L.; Potma, Eric O.; Puoris’haag, Mehron; Côté, Daniel; Lin, Charles P.; Xie, X. Sunney "Chemical imaging of tissue in vivo with video-rate coherent anti-Stokes Raman scattering microscopy," Proc. Natl. Aca. Sci. 102, 16807 (2005).

Kou, S.C.; Cherayil, Binny J.; Min, Wei; English, Brian P.; Xie, X. Sunney "Single-Molecule Michaelis-Menten Equations," J. Phys. Chem. B, 109, 19068-19081 (2005).

Krug II, John T.; Sánchez, Erik J. ; and Xie, X. Sunney "Fluorescence quenching in tip-enhanced nonlinear optical microscopy," Appl. Phys. Lett. 86, 233102 (2005).

Potma, Eric O.; Xie, X. Sunney "Direct Visualization of Lipid Phase Segregation in Single Lipid Bilayers with Coherent Anti-Stokes Raman Scattering Microscopy," ChemPhysChem 6, 77 (2005).

Kou, S.C.; Xie, X. Sunney; Liu, Jun S. "Bayesian Analysis of Single-molecule Experimental Data," Appl. Statist. 54, 469 (2005).

Min, Wei; Luo, Guobin; Cherayil, Binny J.; Kou, S.C.; Xie, X. Sunney "Observation of a Power-Law Memory Kernel for Fluctuations within a Single Protein Molecule," Phys. Rev. Lett. 94, 198302 (2005).